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What is smaller?
Gastrulation is primarily an example of
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Answers
1
Gastrulation is primarily an example of
Proliferation
Differentiation
Migration
2
What is smaller?
Caspase 3
None
Pro caspase 3
3
I want to solubilize (without denaturing) a membrane protein. I should use
An ionic detergent below its CMC
An ionic detergent above its CMC
A non ionic detergent below its CMC
A non ionic detergent above its CMC
4
Confocal microscopy: scans the specimen with a focused laser to get 2 dimensional sections
True
False
5
In a gene, introns are kept while exons are removed
True
False
6
Most histone modifications are covalent modifications to synthesized histones. Why is this necessary for chromatin reg?
Histone modifications are irreversible
Histone motivations need to be dynamic in order to influence function
Histone modifications are applied by various different proteins
Histone modifications need to be permanent in order to ensure function
7
Ribosomes must bind to the 5’ cap before initiating translation
False
True
8
Which transmembrane protein does not have its N-terminus in the ER lumen?
Type III
Type IV
Type I
Type II
9
Does Apaf1 bind bax?
No
Yes
10
Would putting an antibody that brings two RTKs together cause MEK to be phosphorylated?
True
False
11
Fos and Jun are
Mitogens
Early response genes
Delayed response genes
Morpheme
12
What is a good definition for protein domain?
A protein segment that folds dependently
A protein that upholds processes around itself
A protein segment that folds independently
Ubiquination
13
Pex proteins function in the peroxisome
True
False
14
A has 2 hydrogen bonds with T while C has 3 hydrogen bonds with G
False
True
15
How might one determine where ubiquitin is located in the cell
Use magnet waves from electron microscopy
Tag it with GFP and use fluorescence microscopy
Use FRAP at ultra definition
16
Where is Cdc14 held “inactive”
Endosome
ER
Mitochondria
Nucleolus
17
Which of the following proteins are not used during DNA repair
Promise
GFP’s
DNA polymerase
RPA’s
18
Which proteins help the correct tRNA occupy the A site?
RF’s
TF’s
EF’s
IF’s
19
What type of electron microscopy submerges a sample into an electron dense liquid that shows up around it?
FRAP
Yeast 2-hybrid
Fluorescence microscopy
Negative stain EM
20
does cGMP cause sodium channels to open in the visual system?
False
True
21
Which of the following phospholipases are correctly paired with one of their products
PLA2 produces LPA & PLD produces PA
PLA2 produces PA
PLC produces PA & PLD produces LPA
PLA1 produces PA
22
The SRP binds nascent polypeptides with 15 hydrophobic a.a’s and locks the ribosome onto the translocon of ER membrane
False
True
23
SAMs are places of growth
True
False
24
Would introducing a mutation in Ras cause MEK to be phosphorylated?
True
False
25
What kind of protein adds phosphates to another protein or lipid?
GFP
Kinase
Phosphatase
ubiquitin
26
Which of the following is NOT the role of molecular chaperones in the folding of cellular proteins?
catalyze the folding of proteins in crowded environments
help make the protein folding process in the cell more reliable
Help prevent formation of protein aggregates
They specify the final three-dimensional shape of proteins
27
The neural tube is ectoderm that will become the nervous system
False
True
28
Passing cells is what you do to start a new culture
False
True
29
siRNA’s can bind to the RITS complex
False
True
30
Spindle assembly checkpoint occurs after mitosis
False
True
31
The process by which the ribosome small subunit starts at the 5’ cal and find the start codon is called
Scanning
Idk
DPN1 digest
Transformation
32
I centrifuge a cell extract gently and take the Supernatant I centrifuge at high speed and take the pellet. I have
Ribosomes
Mitochondria
DNA
RNA
33
A retrograde vesicle that left the cis-golgi would… Choose all correct answers.
fuse with the medial-Golgi and Have a COP-I coat
fuse with the ER and have a COP-I coat
Have a COP-II coat fuse with the medial-Golgi
34
Which will have the most genes made inaccessible in heterochromatin?
Totipotent stem cells
Pluripotent stem cells
Unipotent stem cells
35
Collagen genes are highly expressed. They are likely to be found in
Heterochromatin
Ribosomes
Euchromatin
Centromeres
36
During the process of nuclear import, a GEF works in the:
nucleus to exchange GTP for GDP bound to Ran.
cytoplasm to use GTP to release Ran from importin.
nucleus to activate the intrinsic GTPase activity of Ran.
cytoplasm to exchange GTP for GDP bound to Ran.
37
G alpha t is associated with cGMP phosphodiesterase
False
True
38
Which value tells you how well your mean represents the population?
Median
SD
SEM
SEP
39
Silencers decrease expression of a gene by packaging it tightly into heterochromatin
False
True
40
Transmembrane proteins
Are typically exposed only to one side of the membrane
Are covalently attached to a fatty acid that inserts into membrane
Often further attached to the membrane via GPI anchor
Can be released from the membrane by a gentle extraction procedure
41
Do oats and other grain plants have cellulose in their cell walls
True
False
42
In a double helix
Purines pair with purines
The two DNA strands are identical
Thymine pairs with cytosine
The two DNA strands run antiparallel
43
Is the geometry tetrahedron made by a lipid?
False
True
44
Which of the following are tyrosine kinases?
Cytokine receptor & RTK’s
Cytokine receptor & smads
TGF receptor & RTKs
TGF receptor & cytokine receptor
45
Which process recycles NADH when there is no oxygen?
Oxidative phosphorylation
Anaerobic respiration
Respiratory chain
Kreb’s cycle
46
What process is responsible for the formation of a thumb?
Relay signaling
Gradient signaling
Reciprocal induction
Boundary formation
47
Oats and other grain plants do photosynthesis
False
True
48
Pectin is used to make honey
True
False
49
Which is not a valid part of protein trafficking?
. cis-Golgi → TGN (Trans Golgi Network)
Early endosome → plasma membrane
TGN → late endosome
TGN → mitochondria
50
What is not a storage option for metals in cell biology?
Let it accumulate in the cytosol
To not store it (excrete it)
Vacuole
Macromolecules
51
What process uses DNA ligase?
Subliming
DNA sequencing
Site directed mutagenesis
Restriction mapping
52
What protein works ahead of replication fork?
Topoisomerase
Aninoacyl-tRNA synthase
Phosphodiesterase
DNA polymerase
53
Which type of electron microscopy submerges a sample in an electron dense liquid that shows up around it?
Negative Stain EM
Shadowing EM
Thin-section EM
Scanning EM
54
FACS: you want to separate cells that are expression protein A
False
True
55
areas of sphingolipids and cholesterol that are more related and ordered than the fluid around membrane are?
Drafts
Kinases
Lipid rafts
Lignins
56
What type of ground tissue is found in roots?
Pith
Mesophyll
Stomata
Cortex
57
Which step in cytoskeleton polymerization is rate limiting?
Treadmiling
Steady state
Elongation
Nucelation
58
Ruffle-like membrane protrusions are called?
Filopodia
Stress fibers
Rufflepodia
Lamellapodia
59
Okazaki fragments are small fragments of DNA that eventually are located to form which of the following strands of DNA?
Joining
Parent
Leading
Lagging
60
Which cellular structure contains unconventional myosin?
Sacromeres
Stress fibers
Cytokinesis ring
Endocytic vesicles
61
Dr. KB is
Sweet but shouldn’t be a professor
Inefficient
Disorganized
All of the above
62
Where are skin stem cells found
None
Bone marrow
Crypt
Bulge
63
Which vesicular coat is involved in going from the ER to the cis golgi?
Clathrin
None
COP I
COP-II
64
PDI has nothing to do with peroxisomes
True
False
65
Which are phosphorylated by JAK’s?
Cytokine receptors & calmodulin
Smads & calmodulin
Cytokine receptors & STATs
STATs & calmodulin
66
Is Bad detected by Brdu?
Yes
No
67
PTSI/PTS2 signals sequence targeting proteins to peroxisomes
False
True
68
Which cell junctions are not associated with actin cytoskeleton?
Desmosomes
Focal adhesions
Tight junctions
Adherent junctions
69
Which of the following is not needed for PCR?
Helicase
Primers
dNTPs
Template
70
Phloem & xylem surround meristems
True
False
71
siRNA’s are one source of euchromatin
False
True
72
Retroviruses contain RNA
True
False
73
Pulse chase: you would use this to see where your protein was transported to in the cell
False
True
74
Fluorescence microscopy: uses a light microscope with a optical component to take advantage of the different lights
True
False
75
Which of the following factors recognizes the UAG, UAA, and UGA codons?
DNA polymerase
Elongation factors
Termination factors
RNA polymerase
76
Is Bad found in the outer mitochondrial membrane?
No
Yes
77
SiRNA’s cause transcription repression through histone methylation
False
True
78
Why doesn’t Na go through a resting K channel?
Doesn’t make the right contacts
Na and k have different charges
Na and K have different chemical properties
The channel is only meant for K
79
Does the retina change shape in response to sound?
False
True
80
Laminin is a
Multiadhesive matrix protein
Proteoglycan
Intermediate filament
Cell wall component
81
Proteins to be degraded are modified by a single ubiquitin
False
True
82
Immortalized cells will always have contact inhibition
True
False
83
Confocal microscopy: has the ability to resolve cellular component as small as 2nm
True
False
84
Would activating RAF cause MEK to be phosphorylated?
True
False
85
Yeast 2 hybrid: you want to see if protein A interacts with protein B
False
True
86
Which is not a way to reduce out of focus light to fluorescence microscopy?
Make background darker
Allow higher residual
Immunofluorescence microscopy
87
RNA cleavage involves mitochondria
True
False
88
Cell fractionation: you want to see where your protein localizes in a cell
False
True
89
Which of the following is seen when a single mRNA is simultaneously translated to form multiple copies of a polypeptide
Multisome
Polysome
Phagosome
Nucelosome
90
siRNA’s cause transcription repression through histone methylation
True
False
91
In a double strand dna molecules one of the chains has CCCATTCTA. There are no C residues in other chain
True
False
92
Immortal cell lines are cells that can continue to proliferate in culture for an indefinite # of generations
False
True
93
PDI functions in the peroxisome
False
True
94
unreplicated DNA checkpoint happens at G2 M
False
True
95
GLUT proteins are glucose
Pumps
Metabolizes
Carriers and metabolizers
Carriers and transporters
96
Will statistical analysis tell us the reason an error occurred in measurements?
Um maybe?
Duh!
Let’s ask chat gbt
No bruh
97
G alpha q is associated with adenylate cyclase
True
False
98
Phloem transports sucrose away from where it’s made
False
True
99
Lignin is not waterproof
True
False
100
What type of protein is APC?
Ubiquitin ligaments
Kinase
Protease
GEF
101
What protein is recruited by Grb2 to the plasma membrane?
PI3K
MAP kinase
SOS
RTK
102
The TATA box is only used for rRNA transcription
True
False
103
Catalase neutralizes peroxides
False
True
104
Which organelles are correctly paired with the signal sequences that sort proteins to go inside them?
ER
Peroxisomes- PTS1
Nucleus- NES
Late endosome/lysosome
105
G alpha s is associated with adenylate cyclase
True
False
106
Which of the following is NOT a DNA sequence
enhancer
ARS
Centromere
Transcription factor
107
The plaque assay takes advantage of the lysogenic viral cell
False
True
108
Spindle assembly checking happens with metaphase and anaphase
False
True
109
If a protein is part of the citric acid cycle, which translocon would be used?
TOC
TIC
TEM
TIM
110
Which type of endocytosis is associated with transferrin
Phagocytosis
Pinocytosis
Caveolin mediated endocytosis
Receptor-mediated endocytosis
111
Does bad bind apaf-1?
Yes
No
112
Which are produced by the dark reactions of photosynthesis?
NADPH
O2
ATP
sucrose
113
If the concentration of free monomers in solution is -, the critical concentration will grow
Equal to
None
Above
Below
114
In cell culture, what is a "callus"?
What you get on hands/fingers
Result of wearing shoes that hurt your feet
mass of undifferentiated plant cells
Hela cells
115
All checkpoints have to be functioning in order for a cell to complete a cell cycle
False
True
116
There are two ways to regulate which genes are transcribed. Which term does not fit with the other 3?
Transcription factors
Activator
Regulatory site is far away from the promoter
RNA polymerase binds promote better or worse
117
MDR protein pumps drugs out of the cell
True
False
118
Phosphatidyl-inositol: phosphoglycerides
False
True
119
Central dogma
RNA-protein-DNA
Ligma balls
DNA-RNA-protein
Transcription-translation-protein
120
Which statement is NOT correct regarding electron microscopy?
SEM has the worst resolution
negative staining requires the sample to be degraded with acid
Uses magnets
Tomography allows a 3D image to be made
121
FRAP: you want to see if a fluorescent tagged membrane protein can move
False
True
122
Proteins are synthesized from the N terminus to the C terminus by a ribosome
True
False
123
The ends of chromosomes are called what and are maintained by what enzyme?
Telomerase & telomeres
Blunts & kinase
Rafts & kinase
Telomeres & telomerase
124
What does BrdU stain?
Broken DNA
Healthy cells
A particular mRNA
A subset of spots on a gene chip
125
Fluorescence microscopy: required two sets of filters
False
True
126
Palmitate (16:0) is a ____ with ____ carbons and _____ double bonds
carbon chain; 8; 12
carbon chain; 16; 0
fatty acid; 16; 0
fatty acid; 12; 8
127
All of the following proteins interact with exposed amino acids during protein folding in the ER except
Called on
PDI
Prolyl isomers
BiP
128
What is not part of chromatin remodeling?
SWI/SNF complex
Repressor
Silencer
Enhancer
129
Nonpolar amino acids tend to be found in the interior of proteins
True
False
130
What is another name for a death receptor
Immobile phagocyte
Dead cell
TNF
131
FISH: you use a probe to see if there are multiple copies of a gene present
True
False
132
Nucelosapsid is a protein coat with DNA inside
False
True
133
Chromosome segregation checking happens after the exit from mitosis
True
False
134
Which of the following small GTPases are NOT involved in vesicle budding or docking?
Ras and Ran
ARF and Rab
Rab and Ras
ARF and Ran
135
Which of the following pairs of codons might you expect to be ready by the same tRNA as a result of wobble
CAC & CAU
GUU & UGC
AUA & GCG
CUG & UUC
136
Which statement regarding the marking of a protein by polyubiquitylation to signify degredation is true?
requires the hydrolysis of one ATP molecule to ADP per polyubiquitin
It involves the recognition of the target protein by an E2-E3 ligase
It is carried out by the proteasome complex
It is typically done on an arginine residue in the target protein
137
Which proteins are necessary for the establishment of the plasma membranes resting potential?
Na+ K+ pumps
Potassium leak channel
Na+ & K+ pumps/ resting K+ channels
138
RNA pol 2 is responsible for transcribing mRNA
True
False
139
Which type of microscopy has the best resolution?
Shadowing EM
FRET
Patch clamp
Electron microscopy
140
Which is not a place the DNA replication transcription or translation starts?
Promoter
Centromere
Start codon
TATA box
141
KB or Karam?
Karam
Kelly?
Both are pretty bad
KB
142
Does differential centrifugation separate organelles based on shape/size/mass?
False
True
143
RNA pol 1 is responsible for transcribing rRNA
True
False
144
Ca 2+ pump moves Ca 2+ into the ER and SR
True
False
145
DNA sequencing does not use DNA ligase
False
True
146
RNA cleavage involves mRNA, tRNA, occurs in prokaryotes and eukaryotes
False
True
147
“The actin was found in bundles extending the length of the cell” is an example of what kind of statement?
Useless moron
Qualitative
Quantitative
Superlative
148
Do oats and other grain plants have angiosperms
False
True
149
FRET: you look for expression of a blue color to see if two proteins interact
False
True
150
The neural tube is just about the notochord, a rigid structure that provides it with support
True
False
151
A CDK is active when its phosphorylated on theronine 161 and deposphorylated on tyrosine 15
True
False
152
An envelope is a membrane under the capsid
True
False
153
Which type of endocytosis is associated with transferrin?
Receptor mediated endocytosis
Pinocytosis
Phagocytosis
154
Bright field: employs a light microscope and requires that the samples be fixed and stained in order to reveal details
True
False
155
what does the TATA box recruit?
AFT
TFP
TBP
RNA
156
What kind of protein removes phosphates from another protein or lipid?
Kinase
HLC
dromide
Phosphatase
157
Myosin light chain binds the neck of myosin heavy chain and is activated by Ca
False
True
158
Which phospholipase would cut phosphatidylcholinr into choline and phosphatic acid?
PLD
PLA
Kinase
PLC
159
FISH: you would use this if your protein of interested was a voltage gated channel
False
True
160
Which enzyme adds ubiquitin to the protein to be degraded?
Phagocytosis
Ubiquitin-kinase (E2)
DNA polymerase
Ubiquitin-ligase (E3)
161
Is Apaf1 a pro caspase?
No
Yes
162
Phloem is the inner layer of wood
False
True
163
DNA damage checkpoint happens at any point in cell cycle
False
True
164
Cholesterol: phosphoglyerides
True
False
165
Which lipid is not glycerol based?
Phosphatidylethanamine
Diacyglycerol
Lysophosphatidic acid
Ceramide
166
Pseudogenes
Assist in protein transformation
Are usually not expressed
Have mitochondria
Are usually expressed
167
siRNA’s cause translation repression through histone methylation
True
False
168
Collagen is usually found as euchromatin
True
False
169
Cholesterol is neither phosphoglycerides nor spingolipids
No
Yes
170
Pulse chase: you want to see where your protein localizes in a cell
False
True
171
An enlongating ribosome is bound to appropriate tRNA’s in both the A and P sites. What happens next?
The carboxyl end of released from the A site
The carbonyl end of the polypeptide is released from the P site
The amino end of the polypeptide chain is released from the P site
The amino end of the AA is released from the A site
172
Which statements are true regarding DNA replication?
DNA polymerase has proofreading activity & replication fact. C binds ssDNA
It proceeds in 3’-5’ direction
Helicase supports supercoil and removes excess proteins
Helicase removed supercool and is polar
173
Name one way to make bright field microscopy better
staining the specimen helps with the visibility of the structures you want
FRAP allows for contribution towards magnification of individual specimens
Phase contrast allows for a darker background for culture
Electron microscopy uses magnet radiation to allow precision and focus
174
Scanning electron: required coating sample with a thin layer of a heavy metal
False
True
175
Unlike DNA, RNA uses a uracil base and a deoxyribose sugar
False
True
176
Pectin is used to make jelly
True
False
177
What process is normally used to turn Rb off?
Sumpoylation
Degradation by proteosome
Phosphorylation
Ubiquination
178
RNA editing…
Occurs in prokaryotes and involves mRNA
Occurs in eukaryotes & involved mRNA
Occurs in eukaryotes and involves rRNA
Occurs in prokaryotes and involves rRNA
179
Histones are not often
Methylated
Lipidated
Phosphorylated
Acetylated
180
Reaction enzymes are endonucleases; if they cut both strands at the same place, blunt ends result
False
True
181
Which of the following is not a DNA binding domain?
Helix-sheet-helix
Helix-turn-helix
Leucine zipper
Zinc finger
182
G alpha I is associated with adenylate cyclase
True
False
183
Which is not a stop codon?
UUG
AUG
UGG
GUG
184
Patch clamp: you would use this if your protein of interest was a voltage gated channel
False
True
185
Which proteins are in the ER?
Ran
GFP’s
BiP & signal peptide
Nuceloporins
186
In a gene, exons are kept while introns are removed
True
False
187
Which statement is true regarding tRNA’s?
They are transcribed by RNA polymerase II
Their anyicodons sit on the enlarged subunit of the ribosome
They undergo RNA editing
In order, they occupy the A, P, then E sites on a ribosome
188
Why would a transverse diffusion or flip flop of membrane phospholipids from one leaflet to the other be so rare?
Other membrane activities like flexing and lateral shift inhibit it
Flip passes are enzymes which are transiently stable
For flip flop, the hydrophilic head needs to move through hydrophobic part
189
If a protein has a zinc finger, it is most likely a
Blunt end
Transcription factor
Ribosome
Translation factor
190
SiRNA’s can bind to the RITS complex
True
False
191
What stages of mitosis are correctly matched with what happens
Metaphase: chromosomes line up
Prophase: chromosomes separate
Anaphase: cell separates
Cytokinesis: chromosomes condense
192
All RNA polymerases transcribe the same genomic code
False
True
193
What makes cultures cells useful models to study human disease?
They provide a continuous and uniform source of new cells
They allow for new discovery of unknown cells
They allow to add antigens without effect
They guide scientists in knowing which antibiotics can be used
194
TAF recruits RNA pol to the TATA box
False
True
195
FACS: you look for expression of a blue color to see if two proteins interact
True
False
196
Plants have vacuoles instead of lysosomes
True
False
197
During the import of proteins into the nucleus the importin binds directly to
All of the above
Nuclear localization signals in cargo proteins
Ran-GDP
Lamins
198
Xylem transports fluid down the plant
True
False
199
Phase contrast: uses a light microscope with a optical component to take advantage of light passing through
False
True
200
Which of the following protein kinases are downstream of a G-protein coupled receptor?
PKB & PKC
PKA & JAKs
PKB & PKA
PKA & PKC